Index _ | A | B | C | D | E | F | G | I | K | L | M | N | O | P | Q | R | S | T | U | V | Z _ __version__ (in module maicos) _frame_index (maicos.core.AnalysisBase attribute) _index (maicos.core.AnalysisBase attribute) _obs (maicos.core.AnalysisBase attribute) _trajectory (maicos.core.AnalysisBase attribute) _universe (maicos.core.AnalysisBase attribute) A AnalysisBase (class in maicos.core) AnalysisCollection (class in maicos.core) atomgroup (maicos.core.AnalysisBase attribute) atomgroup_header() (in module maicos.lib.util) atomtypes (in module maicos.lib.tables) B bin() (in module maicos.lib.util) bin_area (maicos.core.CylinderBase._obs attribute) (maicos.core.PlanarBase._obs attribute) (maicos.core.SphereBase._obs attribute) bin_edges (maicos.core.CylinderBase._obs attribute) (maicos.core.PlanarBase._obs attribute) (maicos.core.SphereBase._obs attribute) bin_pos (maicos.core.CylinderBase._obs attribute) (maicos.core.CylinderBase.results attribute) (maicos.core.PlanarBase._obs attribute) (maicos.core.PlanarBase.results attribute) (maicos.core.ProfileCylinderBase.results attribute) (maicos.core.ProfilePlanarBase.results attribute) (maicos.core.ProfileSphereBase.results attribute) (maicos.core.SphereBase._obs attribute) (maicos.core.SphereBase.results attribute) (maicos.DensityCylinder.results attribute) (maicos.DensityPlanar.results attribute) (maicos.DensitySphere.results attribute) (maicos.DielectricCylinder.results attribute) (maicos.DielectricPlanar.results attribute) (maicos.DielectricSphere.results attribute) (maicos.DiporderCylinder.results attribute) (maicos.DiporderPlanar.results attribute) (maicos.DiporderSphere.results attribute) (maicos.modules.pdfcylinder.PDFCylinder.results attribute) (maicos.PDFPlanar.results attribute) (maicos.TemperaturePlanar.results attribute) (maicos.VelocityCylinder.results attribute) (maicos.VelocityPlanar.results attribute) bin_volume (maicos.core.CylinderBase._obs attribute) (maicos.core.PlanarBase.results attribute) (maicos.core.SphereBase.results attribute) bin_width (maicos.core.CylinderBase._obs attribute) (maicos.core.PlanarBase._obs attribute) (maicos.core.SphereBase._obs attribute) bins (maicos.PDFPlanar.results attribute) (maicos.RDFDiporder.results attribute) box_center (maicos.core.AnalysisBase property) (maicos.core.AnalysisBase._obs attribute) C center_cluster() (in module maicos.lib.math) charge_neutral() (in module maicos.lib.util) citation_reminder() (in module maicos.lib.util) CM_parameters (in module maicos.lib.tables) compute_form_factor() (in module maicos.lib.math) compute_rdf_structure_factor() (in module maicos.lib.math) compute_structure_factor() (in module maicos.lib._cmath) correlation() (in module maicos.lib.math) correlation_analysis() (in module maicos.lib.util) correlation_time() (in module maicos.lib.math) corrtime (maicos.core.AnalysisBase attribute) cos_theta_i (maicos.DipoleAngle.resulst attribute) cos_theta_ii (maicos.DipoleAngle.resulst attribute) cos_theta_ij (maicos.DipoleAngle.resulst attribute) CylinderBase (class in maicos.core) D density_weights() (in module maicos.lib.weights) DensityCylinder (class in maicos) DensityPlanar (class in maicos) DensitySphere (class in maicos) deps_par (maicos.DielectricPlanar.results attribute) deps_perp (maicos.DielectricPlanar.results attribute) deps_r (maicos.DielectricCylinder.results attribute) deps_rad (maicos.DielectricSphere.results attribute) deps_z (maicos.DielectricCylinder.results attribute) DielectricCylinder (class in maicos) DielectricPlanar (class in maicos) DielectricSpectrum (class in maicos) DielectricSphere (class in maicos) DipoleAngle (class in maicos) diporder_pair_weights() (in module maicos.lib.weights) diporder_weights() (in module maicos.lib.weights) DiporderCylinder (class in maicos) DiporderPlanar (class in maicos) DiporderSphere (class in maicos) DiporderStructureFactor (class in maicos) DOC_DICT (in module maicos.lib.util) DOI_LIST (in module maicos.lib.util) dprofile (maicos.core.ProfileBase.results attribute) (maicos.core.ProfileCylinderBase.results attribute) (maicos.core.ProfilePlanarBase.results attribute) (maicos.core.ProfileSphereBase.results attribute) (maicos.DensityCylinder.results attribute) (maicos.DensityPlanar.results attribute) (maicos.DensitySphere.results attribute) (maicos.DiporderCylinder.results attribute) (maicos.DiporderPlanar.results attribute) (maicos.DiporderSphere.results attribute) (maicos.TemperaturePlanar.results attribute) (maicos.VelocityCylinder.results attribute) (maicos.VelocityPlanar.results attribute) E eps_par (maicos.DielectricPlanar.results attribute) eps_par_coll (maicos.DielectricPlanar.results attribute) eps_par_self (maicos.DielectricPlanar.results attribute) eps_perp (maicos.DielectricPlanar.results attribute) eps_perp_coll (maicos.DielectricPlanar.results attribute) eps_perp_self (maicos.DielectricPlanar.results attribute) eps_r (maicos.DielectricCylinder.results attribute) eps_rad (maicos.DielectricSphere.results attribute) eps_z (maicos.DielectricCylinder.results attribute) F frames (maicos.core.AnalysisBase attribute) FT() (in module maicos.lib.math) G get_center() (in module maicos.lib.util) get_cli_input() (in module maicos.lib.util) get_compound() (in module maicos.lib.util) I iFT() (in module maicos.lib.math) K KineticEnergy (class in maicos) L L (maicos.core.PlanarBase._obs attribute) M maicos.core module maicos.lib module maicos.lib._cmath module maicos.lib.math module maicos.lib.tables module maicos.lib.util module maicos.lib.weights module maicos_banner() (in module maicos.lib.util) means (maicos.core.AnalysisBase attribute) miller_indices (maicos.Saxs.results attribute) module maicos.core maicos.lib maicos.lib._cmath maicos.lib.math maicos.lib.tables maicos.lib.util maicos.lib.weights N new_mean() (in module maicos.lib.math) new_variance() (in module maicos.lib.math) O odims (maicos.core.PlanarBase property) P pdf (maicos.PDFPlanar.results attribute) PDFCylinder (class in maicos.modules.pdfcylinder) PDFPlanar (class in maicos) phi_bins (maicos.modules.pdfcylinder.PDFCylinder.results attribute) phi_pdf (maicos.modules.pdfcylinder.PDFCylinder.results attribute) PlanarBase (class in maicos.core) pos_cyl (maicos.core.CylinderBase attribute) pos_sph (maicos.core.SphereBase attribute) profile (maicos.core.ProfileBase.results attribute) (maicos.core.ProfileCylinderBase.results attribute) (maicos.core.ProfilePlanarBase.results attribute) (maicos.core.ProfileSphereBase.results attribute) (maicos.DensityCylinder.results attribute) (maicos.DensityPlanar.results attribute) (maicos.DensitySphere.results attribute) (maicos.DiporderCylinder.results attribute) (maicos.DiporderPlanar.results attribute) (maicos.DiporderSphere.results attribute) (maicos.TemperaturePlanar.results attribute) (maicos.VelocityCylinder.results attribute) (maicos.VelocityPlanar.results attribute) ProfileBase (class in maicos.core) ProfileCylinderBase (class in maicos.core) ProfilePlanarBase (class in maicos.core) ProfileSphereBase (class in maicos.core) Python Enhancement Proposals PEP 440, [1] Q q (maicos.DiporderStructureFactor.results attribute) R R (maicos.core.CylinderBase._obs attribute) (maicos.core.SphereBase._obs attribute) rdf (maicos.RDFDiporder.results attribute) RDFDiporder (class in maicos) render_docs() (in module maicos.lib.util) results (maicos.core.AnalysisBase attribute) (maicos.DielectricSpectrum attribute) rot (maicos.KineticEnergy.results attribute) run() (maicos.core.AnalysisBase method) (maicos.core.AnalysisCollection method) S save() (maicos.core.AnalysisCollection method) (maicos.core.ProfileBase method) (maicos.DielectricCylinder method) (maicos.DielectricPlanar method) (maicos.DielectricSpectrum method) (maicos.DielectricSphere method) (maicos.DipoleAngle method) (maicos.DiporderStructureFactor method) (maicos.KineticEnergy method) (maicos.modules.pdfcylinder.PDFCylinder method) (maicos.PDFPlanar method) (maicos.RDFDiporder method) (maicos.Saxs method) savetxt() (maicos.core.AnalysisBase method) Saxs (class in maicos) scalar_prod_corr() (in module maicos.lib.math) scattering_intensities (maicos.Saxs.results attribute) scattering_vectors (maicos.Saxs.results attribute) sems (maicos.core.AnalysisBase attribute) SphereBase (class in maicos.core) structure_factors (maicos.DiporderStructureFactor.results attribute) struture_factors (maicos.Saxs.results attribute) sums (maicos.core.AnalysisBase attribute) symmetrize() (in module maicos.lib.math) T t (maicos.DipoleAngle.results attribute) (maicos.KineticEnergy.results attribute) temperature_weights() (in module maicos.lib.weights) TemperaturePlanar (class in maicos) times (maicos.core.AnalysisBase attribute) trajectory_precision() (in module maicos.lib.util) trans (maicos.KineticEnergy.results attribute) transform_cylinder() (in module maicos.lib.math) transform_sphere() (in module maicos.lib.math) U Unit_vector (class in maicos.lib.util) unit_vectors_cylinder() (in module maicos.lib.util) unit_vectors_planar() (in module maicos.lib.util) unit_vectors_sphere() (in module maicos.lib.util) unwrap_refgroup() (in module maicos.lib.util) V velocity_weights() (in module maicos.lib.weights) VelocityCylinder (class in maicos) VelocityPlanar (class in maicos) Z z_bins (maicos.modules.pdfcylinder.PDFCylinder.results attribute) z_pdf (maicos.modules.pdfcylinder.PDFCylinder.results attribute) zmax (maicos.core.PlanarBase attribute) zmin (maicos.core.PlanarBase attribute)